Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887074.1_cds_XP_016441392.1_36756
CDS Infomation

[gene=LOC107766986] [db_xref=GeneID:107766986] [protein=E3 ubiquitin-protein ligase ATL31-like] [protein_id=XP_016441392.1] [location=complement(16957..18426)] [gbkey=CDS]
Sequence

ATGGTGAAAGCTCATGATGGATTCGTTTCACTTCCCATTTATCTCCTCATCTTGTTGGTA
TTATCGCGTCCTATGATTCCAAATGCGGCAGCGCTGCCATCAAATCCCGAGAATCGTGTC
CGGTACCCACGTCCAAGTATTAGCCCAGCAATGGCCATTATCATAGTGGTTCTCATAGCT
GCCTTGTTTTTCGTTGCACTTTTCTCGATTTACATTCGCTACCGCATCTCCACTAATGGT
AACAGCATCCTCCAAACACTTTCCACGCGCCGACGCCCTTCTGCTGCAACACGTGGACTC
GACAATTCAGTCATCGAGACTTTCCCCACCTTTGCATACGCCGAAGTGAAGGATCATCAT
ATTGGCAAGGGTGGTTTGGAGTGTGCAGTATGCTTGAACGAGTTTGAAGACGACGAAAAG
CTGCGGTTGATCCCAAAGTGTGATCACGTGTTCCACCCTGAATGCATCGGTGCTTGGCTC
AAGTCTCACGTCACTTGCCCCGTTTGTCGAGCTGACCTTAGTATTCCTCAACCTGATGAA
CCACCGGTTAAAGCTCATGAGGTACTAAACATTGATCAAGAAGGGACAGAGAATCTGCAG
CAAAATAAGGAAGTTTCAATACAAATAGGGAGTGATGAAAATATAAAACAGCAAGAGGAT
CCCTCTAGTGTTAAGCGATTGAGTTTCGACGTGCCGAACCAGCCACCAAGATCGTTTTCT
ATAAAGAGACCAAAGATTTTGAACAAGTTTAGGTCACACTCGACTGGCCATTCATTGGTG
GTACCGGGGGAGAATTTGGACAGGTACACTCTCAGATTATCGGAGAATGTTAGAAAAGAG
GTAATGAACCGGGCACTACTAAACCGGACAAAGAGTTGTGCAGTCACTTTACCAAGACAT
GGTAGCACTAAAATAGAGTACAGAAAAGGTGTCGGGAAGGAAAGCAATAACGAAGTCTCA
ATAGAAATAGAGACTGATGAAAATTTGATGGTACAACAAGAGAAGACCTGTAATGTTACG
CGAAATTTGAGTATCAACGTGCCGAAGCGGCCGCCAAGGTCGCTTTCTATGAAGAGACCA
AGGACATTGAGCAGGTTTAGATCATTCTCGACCGGCCACTCATTGGTGATAGCGGGGGAG
AATTTGGACCAGCATACTCTTAGATTACCGGAGAATGTTAGGAAAGAGGTAATGAACCGG
GCATTGCTGAACCGGACAAAGAGTTGCGCAGTCACTTTATCAAGATTTGGTAGCACTAGA
AGCGGGTACAGAACCGGAAATGGAGAAGGAAGAAAGATTGTATCACCATTCTTTACTAGA
GGTCCATCGTTGAAGTCACCGAAAATAATGGTTGATATCGAAGAGGGGTCCACTTCACGC
AGTGTAAAAATGGCAATCAAAATGCCGTCGTTCAAATGCTTGGAGCCAAAAGGTGATGAA
GCCAGTTTGCTGACAATTGAGAAAGCATAA

Peptide Sequence

PEP ID

XP_016441392.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Nicotiana tabacum]
Sequence

MVKAHDGFVSLPIYLLILLVLSRPMIPNAAALPSNPENRVRYPRPSISPAMAIIIVVLIA
ALFFVALFSIYIRYRISTNGNSILQTLSTRRRPSAATRGLDNSVIETFPTFAYAEVKDHH
IGKGGLECAVCLNEFEDDEKLRLIPKCDHVFHPECIGAWLKSHVTCPVCRADLSIPQPDE
PPVKAHEVLNIDQEGTENLQQNKEVSIQIGSDENIKQQEDPSSVKRLSFDVPNQPPRSFS
IKRPKILNKFRSHSTGHSLVVPGENLDRYTLRLSENVRKEVMNRALLNRTKSCAVTLPRH
GSTKIEYRKGVGKESNNEVSIEIETDENLMVQQEKTCNVTRNLSINVPKRPPRSLSMKRP
RTLSRFRSFSTGHSLVIAGENLDQHTLRLPENVRKEVMNRALLNRTKSCAVTLSRFGSTR
SGYRTGNGEGRKIVSPFFTRGPSLKSPKIMVDIEEGSTSRSVKMAIKMPSFKCLEPKGDE
ASLLTIEKA

Transcript Sequence

Gene sequence data has not been registered.